Ricardo Wurmus
|
97dc83e636
|
gnu: r-psupertime: Add missing input.
* gnu/packages/bioinformatics.scm (r-psupertime)[native-inputs]: Add
r-testthat.
Change-Id: I9993547e2e757b4218c2229495a7eaa0c8fecbe2
|
2024-12-03 10:54:17 +01:00 |
|
Ricardo Wurmus
|
65e3c3fad1
|
gnu: r-demuxmix: Add missing input.
* gnu/packages/bioinformatics.scm (r-demuxmix)[native-inputs]: Add r-testthat.
Change-Id: Ia09b929b4d5bb521d58fb74f17f1ac91a4d44a60
|
2024-12-03 10:54:17 +01:00 |
|
Ricardo Wurmus
|
beacf93206
|
gnu: r-cmdstanr: Add missing input.
* gnu/packages/bioinformatics.scm (r-cmdstanr)[native-inputs]: Add
r-testthat.
Change-Id: Idd81b903e9e9a8308703c9ee8dc5583a04854678
|
2024-12-03 10:54:17 +01:00 |
|
Ricardo Wurmus
|
77cd472062
|
gnu: r-asset: Add missing input.
* gnu/packages/bioconductor.scm (r-asset)[native-inputs]: Add r-biocgenerics.
Change-Id: Iecfe6093665033d41b43d0ead6fa9d3f3fd54d81
|
2024-12-03 10:54:17 +01:00 |
|
Ricardo Wurmus
|
a2153801fb
|
gnu: r-savr: Disable vignettes.
* gnu/packages/bioconductor.scm (r-savr)[native-inputs]: Add r-testthat.
[arguments]: Disable vignettes.
Change-Id: If5a5928d3f7fde5d3360184b229894d92b715d03
|
2024-12-03 10:54:17 +01:00 |
|
Ricardo Wurmus
|
3b0b56b6ff
|
gnu: r-lemon: Add missing input.
* gnu/packages/cran.scm (r-lemon)[native-inputs]: Add r-vdiffr.
Change-Id: If7cf93031ea6a97176d7c39751aa8d6fd0858ca5
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
e9dc86d789
|
gnu: r-sqldf: Add missing input.
* gnu/packages/cran.scm (r-sqldf)[native-inputs]: Add r-svunit.
Change-Id: Id62cb9aec38c547ca08f0b9ca57c190d68ef232f
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
6eb253beb8
|
gnu: r-regioner: Add missing input.
* gnu/packages/bioconductor.scm (r-regioner)[native-inputs]: Add
r-biocmanager.
[arguments]: Add phase 'delete-bad-tests.
Change-Id: I452297d9b7c776624e54bec376ed14efe4521d55
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
8dcbf12977
|
gnu: r-biotmle: Disable tests.
* gnu/packages/bioconductor.scm (r-biotmle)[native-inputs]: Add r-biotmledata.
[arguments]: Disable tests.
Change-Id: Ia854a6278055a2617db62cbe360b8e108e5584c7
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
6665312474
|
gnu: Add r-biotmledata.
* gnu/packages/bioconductor.scm (r-biotmledata): New variable.
Change-Id: If0793889ddf09b31333c8331cc5ad87f72c16ac2
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
4e2cb58f19
|
gnu: r-qdnaseq: Add missing input.
* gnu/packages/bioconductor.scm (r-qdnaseq)[native-inputs]: Add r-biocstyle.
Change-Id: I6a22fb4208122c5f1a6c50421129722e5b98e11d
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
90e9bb88af
|
gnu: r-motifmatchr: Add missing inputs.
* gnu/packages/bioconductor.scm (r-motifmatchr)[native-inputs]: Add
r-bsgenome-hsapiens-ucsc-hg19.
Change-Id: I90b4c258c9685047287e1e5eedbdbe9b9ce26f8f
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
5e80d26d7b
|
gnu: r-glmgampoi: Add missing inputs.
* gnu/packages/bioconductor.scm (r-glmgampoi)[native-inputs]: Add
r-biocparallel, r-limma, r-mass, r-scran, and r-zoo.
Change-Id: I5019e1b6efdad8c98245bef7512265b2141f78c9
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
c393ab558d
|
gnu: r-activedriverwgs: Add missing input.
* gnu/packages/bioconductor.scm (r-activedriverwgs)[native-inputs]: Add
r-testthat.
Change-Id: Ieb45284d6a240bc88081da0018a7163a66e78b22
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
843dc2891a
|
gnu: r-refgenome: Disable tests.
* gnu/packages/cran.scm (r-refgenome)[arguments]: Disable tests.
Change-Id: I950bdf4463485fb1880934da096915ad50f3ae9e
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
ee0060e609
|
gnu: r-sictools: Disable tests.
* gnu/packages/bioconductor.scm (r-sictools)[arguments]: Disable tests.
Change-Id: Id692ec7c7d5dcb17628fe818b7d116e9261ad60f
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
a477aaf6ef
|
gnu: r-ffbase: Add missing inputs.
* gnu/packages/cran.scm (r-ffbase)[native-inputs]: Add r-laf and r-testthat.
Change-Id: I6e7e84d823e4bf4467829a78bbe8b77e26f25b8d
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
e429db9a4b
|
gnu: r-gutils: Add missing input.
* gnu/packages/bioinformatics.scm (r-gutils)[native-inputs]: Add r-testthat.
Change-Id: I1b5e34441b48bc92bff6538378d2e2bbc7111631
|
2024-12-03 10:54:16 +01:00 |
|
Ricardo Wurmus
|
3643102307
|
gnu: Add r-laf.
* gnu/packages/cran.scm (r-laf): New variable.
Change-Id: I666b904506a929bd6bfac6782d1f4f489282ae84
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
15695cf1f1
|
gnu: r-bamsignals: Add missing inputs.
* gnu/packages/bioconductor.scm (r-bamsignals)[native-inputs]: Add
r-rsamtools.
Change-Id: Ifdca0e50c90349ba4179f80ea1fed91cd9ba37db
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
84406506e7
|
gnu: r-biocthis: Disable tests.
* gnu/packages/bioconductor.scm (r-biocthis)[arguments]: Disable tests.
Change-Id: Icd1a846013a36c3c8555bdcb2d6ba7dce6a8e09c
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
e89a6deac1
|
gnu: r-rticles: Add missing inputs.
* gnu/packages/cran.scm (r-rticles)[native-inputs]: Add r-testthat and
r-withr.
Change-Id: Ia5776a0f08623f79fee2f9a9a3d2a6eeb45c9ded
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
8769b0c0a9
|
gnu: r-rsconnect: Add missing input.
* gnu/packages/cran.scm (r-rsconnect)[native-inputs]: Add tzdata-for-tests.
Change-Id: I3bf6ef36aa5e8737aa17ce74c9141b5e784fa6df
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
c2a1fbc8d4
|
gnu: r-visnetwork: Disable tests.
* gnu/packages/cran.scm (r-visnetwork)[arguments]: Disable tests.
Change-Id: I8eb926630ff35dcf6833f6dca73b54e58d84700f
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
87bd6cc46a
|
gnu: r-mi: Add missing inputs.
* gnu/packages/cran.scm (r-mi)[native-inputs]: Add r-betareg, r-survival, and
r-truncnorm.
Change-Id: I79350494404965b3f1b610dafcd1e05f3fc0c02f
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
be40f6d328
|
gnu: r-spectra: Disable tests.
* gnu/packages/bioconductor.scm (r-spectra)[arguments]: Disable tests.
[native-inputs]: Add missing inputs r-mzr and r-patrick.
Change-Id: I7d9dca3c1f17c0a57d7b6cc7479e08ea5bb11843
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
8067c491d4
|
gnu: Add r-betareg.
* gnu/packages/cran.scm (r-betareg): New variable.
Change-Id: I67839c22e6374dcd9e9f0c12d08770d8103ead6d
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
92a45f6e77
|
gnu: r-powertcr: Add missing input.
* gnu/packages/bioconductor.scm (r-powertcr)[native-inputs]: Add
r-biocgenerics.
Change-Id: Ieb0f7f2bd4362a9f1d6c4a0b9b937e8be81b7323
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
b05ecbce42
|
gnu: r-freetypeharfbuzz: Disable tests.
* gnu/packages/cran.scm (r-freetypeharfbuzz)[arguments]: Disable tests.
[native-inputs]: Add r-testthat.
Change-Id: Ibd82aacff87c79b2c3f061035b14bb750fcee239
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
70f0cf0cf9
|
gnu: r-mzr: Add missing inputs.
* gnu/packages/bioconductor.scm (r-mzr)[native-inputs]: Add r-codetools,
r-msdata, r-mzid, and r-xml.
Change-Id: Iaeb8286a19ddb1bc750710a0e5d5a5cee59b3901
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
bae6c15a33
|
gnu: r-depmixs4: Add missing input.
* gnu/packages/cran.scm (r-depmixs4)[native-inputs]: Add r-gamlss.
Change-Id: Ib7f2ab4f656bda824f2375d0d3ea59908ad1aa5c
|
2024-12-03 10:54:15 +01:00 |
|
Ricardo Wurmus
|
182332fdce
|
gnu: r-sanssouci: Add missing inputs.
* gnu/packages/bioconductor.scm (r-sanssouci)[native-inputs]: Add r-ggplot2
and r-testthat.
[arguments]: Add phase 'delete-bad-tests.
Change-Id: I902b4e4a2163f5ed9cf07d186dfe80068a8ef4a5
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
38b5e102ca
|
gnu: r-unigd: Add missing input.
* gnu/packages/cran.scm (r-unigd)[native-inputs]: Add r-xml2.
Change-Id: Ice50673f8092cf37b2e26bc47bd2b1040e5e652a
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
1c1bc2b855
|
gnu: r-birewire: Add missing input.
* gnu/packages/bioconductor.scm (r-birewire)[native-inputs]: Add
r-biocgenerics.
Change-Id: I3d07db1bd5cafd88f05afe67fc7bf43e07946365
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
11582cba0f
|
gnu: r-seurat5: Deprecate.
* gnu/packages/cran.scm (r-seurat5): Deprecate in favor of r-seurat.
Change-Id: I906ec3bf0d82f93db108ac5f58394bae40347f81
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
2657893bad
|
gnu: r-seurat5object: Deprecate.
* gnu/packages/cran.scm (r-seurat5object): Deprecate in favor of
r-seuratobject.
Change-Id: I44865a9a28b337071ff59462226cf77ad60e4f0f
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
dcc10fbb17
|
gnu: r-downloader: Disable tests.
* gnu/packages/cran.scm (r-downloader)[arguments]: Disable tests.
Change-Id: I69834c27c64153a046aa1022b32826bf0c383b5c
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
28703e2fe9
|
gnu: r-scico: Add missing input.
* gnu/packages/cran.scm (r-scico)[native-inputs]: Add r-dplyr and r-ggplot2.
Change-Id: Ia5a81c607bf9417413dbfcb396cc3b63191e4d15
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
2f46e78161
|
gnu: r-tm: Add missing input.
* gnu/packages/cran.scm (r-tm)[native-inputs]: Add r-snowballc.
Change-Id: I55b18e9c64965746e7563519a483ea688830f6fc
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
cabe33be01
|
gnu: r-stm: Disable vignettes, add test inputs.
* gnu/packages/cran.scm (r-stm)[arguments]: Disable vignettes.
[native-inputs]: Add r-tm.
Change-Id: Ib880a15c940b70054018fb03750e60537561f19b
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
a3c24895b2
|
gnu: r-bridgesampling: Fix vignettes.
* gnu/packages/cran.scm (r-bridgesampling)[arguments]: Add phase 'set-HOME.
Change-Id: Ibde578ee3530fc56b2ee61dc28450260295d283b
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
d6b908092b
|
gnu: r-readbitmap: Add missing inputs.
* gnu/packages/cran.scm (r-readbitmap)[native-inputs]: Add r-pixmap.
Change-Id: I3f8132db83651c091fd8eef3445874f2eb3d98d8
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
d6f538ebdb
|
gnu: r-dyngen: Fix tests.
* gnu/packages/cran.scm (r-dyngen)[arguments]: Add phase 'set-HOME.
Change-Id: If47090b0f9f1d4a0a794ca00ef2ed90226148ab3
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
3f418b67fc
|
gnu: r-variancepartition: Add missing inputs.
* gnu/packages/bioconductor.scm (r-variancepartition)[native-inputs]: Add
r-edger and r-rfast.
Change-Id: I5b9bd4e378d0e7dbd5bc3efc67b96bd1beb563b1
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
7fa90090d5
|
gnu: r-annotationhub: Disable tests.
* gnu/packages/bioconductor.scm (r-annotationhub)[arguments]: Disable tests.
Change-Id: I00a9778eb5d8cd031b956c583f12f42921fec4e2
|
2024-12-03 10:54:14 +01:00 |
|
Ricardo Wurmus
|
24d16b8f4a
|
gnu: r-treeio: Add missing inputs.
* gnu/packages/bioconductor.scm (r-treeio)[native-inputs]: Add r-igraph and
r-xml2.
[arguments]: Add phase 'delete-bad-tests.
Change-Id: I0c5e8ef566acbc8593c6c27a6cc7776778937876
|
2024-12-03 10:54:13 +01:00 |
|
Ricardo Wurmus
|
8b1907470f
|
gnu: r-gofuncr: Add missing inputs.
* gnu/packages/bioconductor.scm (r-gofuncr)[native-inputs]: Add r-homo-sapiens.
Change-Id: I66d6e9985fc420c93eaf77afa348b7bbd29381c7
|
2024-12-03 10:54:13 +01:00 |
|
Ricardo Wurmus
|
d3d701ded9
|
gnu: r-organismdbi: Disable tests.
* gnu/packages/bioconductor.scm (r-organismdbi)[arguments]: Disable tests.
Change-Id: I1a669db2ffc8f9e5bf00666bdfbc53a060508dc6
|
2024-12-03 10:54:13 +01:00 |
|
Ricardo Wurmus
|
3b66f6eaa8
|
gnu: r-txdbmaker: Add test inputs.
* gnu/packages/bioconductor.scm (r-txdbmaker)[native-inputs]: Add r-rmariadb.
[arguments]: Add phase 'delete-bad-tests.
Change-Id: I22fe422410a41998e4fa3552cfaa1dba3e245c10
|
2024-12-03 10:54:13 +01:00 |
|
Ricardo Wurmus
|
2c7f3e365c
|
gnu: Add r-rmariadb.
* gnu/packages/cran.scm (r-rmariadb): New variable.
Change-Id: I12ec88bb93170b4d59f62e3d89bf3d0e110b0eae
|
2024-12-03 10:54:13 +01:00 |
|