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gnu: r-regioner: Add missing input.

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* gnu/packages/bioconductor.scm (r-regioner)[native-inputs]: Add
r-biocmanager.
[arguments]: Add phase 'delete-bad-tests.

Change-Id: I452297d9b7c776624e54bec376ed14efe4521d55
This commit is contained in:
Ricardo Wurmus 2024-11-26 16:19:25 +01:00 committed by Andreas Enge
parent 8dcbf12977
commit 6eb253beb8
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GPG key ID: F7D5C9BF765C61E3
1 changed files with 11 additions and 1 deletions
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gnu/packages/bioconductor.scm
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@ -11289,6 +11289,16 @@ (define-public r-regioner
"1226wljfndqs11p61a79b0rm66jzwljzzi8w9lhx9g165jy3xxay"))))
(properties `((upstream-name . "regioneR")))
(build-system r-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'delete-bad-tests
(lambda _
;; These tests require internet access.
(for-each delete-file
'("tests/testthat/test_randomizationFunctions.R"
"tests/testthat/test_toGRanges.R")))))))
(propagated-inputs
(list r-biostrings
r-bsgenome
@ -11299,7 +11309,7 @@ (define-public r-regioner
r-rtracklayer
r-s4vectors))
(native-inputs
(list r-knitr r-testthat))
(list r-biocmanager r-knitr r-testthat))
(home-page "https://bioconductor.org/packages/regioneR/")
(synopsis "Association analysis of genomic regions")
(description "This package offers a statistical framework based on