mirror/guix
1
0
Fork 0
mirror of https://git.savannah.gnu.org/git/guix.git synced 2025-01-19 14:07:01 +01:00
Code Issues Projects Releases Packages Wiki Activity Actions
147915 commits 90 branches 36 tags 694 MiB
Commit graph

147915 commits

This branch
This branch
All branches
Author SHA1 Message Date
Ricardo Wurmus
29b5471658
gnu: r-pander: Add missing inputs. 
* gnu/packages/cran.scm (r-pander)[native-inputs]: Add
pandoc, r-lattice, and r-testthat.
[arguments]: Add phase 'delete-bad-tests.

Change-Id: Ib1c27b0883a153bc92334f2ad3928380f470d95a
 2024-12-03 10:54:06 +01:00
Ricardo Wurmus
f0b3b617fe
gnu: r-acde: Disable tests. 
* gnu/packages/bioconductor.scm (r-acde)[arguments]: Disable tests.
[native-inputs]: Add r-biocgenerics.

Change-Id: I801951e942c80843bbdd6bc2eb63a31ddaf365a2
 2024-12-03 10:54:06 +01:00
Ricardo Wurmus
fc5a991847
gnu: r-chemmineob: Skip tests. 
* gnu/packages/bioconductor.scm (r-chemmineob)[arguments]: Only build
vignettes.

Change-Id: I8dae82ac4226c33a18009131b7e17662af84589b
 2024-12-03 10:54:06 +01:00
Ricardo Wurmus
d9e4a816aa
gnu: r-chemminer: Add missing inputs. 
* gnu/packages/bioconductor.scm (r-chemminer)[native-inputs]: Add
r-chemmineob, r-rsqlite, r-runit, and r-snow.

Change-Id: I625ae09918c3bdf9b7248e61c6d4959f67175f45
 2024-12-03 10:54:06 +01:00
Ricardo Wurmus
8de6c4af60
gnu: r-rcppml/devel: Add missing input. 
* gnu/packages/machine-learning.scm (r-rcppml/devel)[native-inputs]: Add
r-testthat.

Change-Id: I6a5c29c82d2417d53684dbb278ce4b1703988ffa
 2024-12-03 10:54:06 +01:00
Ricardo Wurmus
9f6ff92e78
gnu: r-rsvg: Add missing input. 
* gnu/packages/cran.scm (r-rsvg)[native-inputs]: Add r-spelling.

Change-Id: Ie31fbf1a745acca112bda7e8432c02c3e9141c9f
 2024-12-03 10:54:06 +01:00
Ricardo Wurmus
9496e53b3c
gnu: r-codedepends: Add missing input. 
* gnu/packages/bioconductor.scm (r-codedepends)[native-inputs]: Add
r-rgraphviz.

Change-Id: I1d122d4ac01b003ea6de5fb1df99399839fcea4d
 2024-12-03 10:54:06 +01:00
Ricardo Wurmus
543aac960b
gnu: r-rgdal: Add missing input. 
* gnu/packages/cran.scm (r-rgdal)[native-inputs]: Add r-sf.

Change-Id: I5ec21fbab319aa71b32a3adc2fd6484bc0a3becf
 2024-12-03 10:54:06 +01:00
Ricardo Wurmus
d7a1387ac3
gnu: r-spacetime: Do not build vignettes. 
* gnu/packages/cran.scm (r-spacetime)[arguments]: Skip vignettes.

Change-Id: I6ea95012e88ef868b516524dea32d6b1c2248a46
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
56da2440b6
gnu: r-rgeos: Add missing inputs. 
* gnu/packages/cran.scm (r-rgeos)[native-inputs]: Add r-testthat and r-xml.

Change-Id: I34ad60f5f342aadd8494ba436e31c3fbf1a873b5
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
c9b7f768d4
gnu: r-geneoverlap: Add missing inputs. 
* gnu/packages/bioconductor.scm (r-geneoverlap)[native-inputs]: Add
r-biocgenerics and r-biocstyle.

Change-Id: I538015455338a1ae8991e3b3a63bc2a951ad1d36
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
9f55a0fd9c
gnu: r-rgraphviz: Add missing input. 
* gnu/packages/bioconductor.scm (r-rgraphviz)[native-inputs]: Add r-xml.
[arguments]: Remove trailing #T.

Change-Id: I08df02db7f4a9d224cee5516c5bb15c836e79f7b
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
90622a0df1
gnu: r-spatstat-core: Add missing input. 
* gnu/packages/cran.scm (r-spatstat-core)[native-inputs]: Add
r-spatstat-model.

Change-Id: If8129db5645af1a6c97bb0505e2220198b573579
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
9552977498
gnu: r-genetclassifier: Add missing input. 
* gnu/packages/bioconductor.scm (r-genetclassifier)[native-inputs]: Add
r-leukemiaseset.

Change-Id: Ic2d2915acb5964b83212a6124b6e596b4f13c006
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
9283f30bae
gnu: Add r-leukemiaseset. 
* gnu/packages/bioconductor.scm (r-leukemiaseset): New variable.

Change-Id: Ida95165c48e074dbf841ec2c43ad3fb7da025fa3
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
26823f682e
gnu: r-rcppde: Add test input. 
* gnu/packages/cran.scm (r-rcppde)[native-inputs]: Add r-lattice.

Change-Id: Ibc945e3de2e055ed57e5451d9de5f08fe04679b3
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
5994d591f7
gnu: r-aims: Add test inputs. 
* gnu/packages/bioconductor.scm (r-aims)[native-inputs]: Add
r-breastcancervdx and r-hgu133a-db.

Change-Id: I980638a323893d1c4d00cfa2b23b3f5367aad9a5
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
b0bd97535c
gnu: Add r-hgu133a-db. 
* gnu/packages/bioconductor.scm (r-hgu133a-db): New variable.

Change-Id: I200ec7534c32e701ecc3117e04c5a10ea9a9ebf8
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
812fe49aa5
gnu: r-diversitree: Disable tests. 
* gnu/packages/cran.scm (r-diversitree)[arguments]: Only build vignettes.
[native-inputs]: Add r-caper, r-expm, r-lubridate, r-minqa, and r-testthat.

Change-Id: I39a584112cddbfee2b4429c4d3a070f5d6c3a2cc
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
0ecbfb6219
gnu: Remove r-xmisc. 
This package has been broken for a while and has been archived on CRAN due to
build errors and inactivity.

* gnu/packages/cran.scm (r-xmisc): Remove variable.

Change-Id: I0e558c13ba6c6694a1d9163c1a42bb4108c3dd33
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
37d0ed2627
gnu: r-performanceanalytics: Add test inputs. 
* gnu/packages/cran.scm (r-performanceanalytics)[native-inputs]: Add r-hmisc
and r-r-rsp.
[arguments]: Add phase 'set-HOME.

Change-Id: Ie8924d4d15fc45071144ae97e6bded22cefdc209
 2024-12-03 10:54:05 +01:00
Ricardo Wurmus
c7bb43e861
gnu: r-h5: Add test inputs. 
* gnu/packages/cran.scm (r-h5)[native-inputs]: Add r-knitr and r-testthat.

Change-Id: I04ebf7186f1646d537cda9fe0a971db2b2ffbc5b
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
2e8b8f034b
gnu: r-hmisc: Disable tests. 
* gnu/packages/statistics.scm (r-hmisc)[arguments]: Only build vignettes.
[native-inputs]: Add r-mvtnorm.

Change-Id: I1ae7536e6256ddb145a8b2de05e2140dfe0054ea
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
5c4aaf2298
gnu: r-pbdmpi: Disable tests. 
* gnu/packages/cran.scm (r-pbdmpi)[arguments]: Only build vignettes.

Change-Id: I7aa190e24fd4172605c773c0508654c42ff0e1fc
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
84f6b3a17d
gnu: r-grimport: Add test input. 
* gnu/packages/cran.scm (r-grimport)[native-inputs]: Add r-lattice.
[arguments]: Skip building vignettes.

Change-Id: If79ccf922de1e4d87c6853bb3dc5db4a82fa2b9a
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
2c05e2d200
gnu: r-maxstat: Add test input. 
* gnu/packages/cran.scm (r-maxstat)[native-inputs]: Add r-survival.

Change-Id: Id9d3b2e61545917973b6744e7687f179df278455
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
46aa444273
gnu: r-grimport2: Add test input. 
* gnu/packages/cran.scm (r-grimport2)[native-inputs]: Add r-gridsvg.

Change-Id: I4fa1d4455b60b221a68a9fb70e905ddd753202a4
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
5233d191af
gnu: r-gridsvg: Add test inputs. 
* gnu/packages/cran.scm (r-gridsvg)[native-inputs]: Add r-lattice.

Change-Id: Icbe34211c7bd9c290d14281fc6e3a130d754d287
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
c6afb73a6a
gnu: r-dyn: Add test inputs. 
* gnu/packages/cran.scm (r-dyn)[native-inputs]: Add r-sandwich.

Change-Id: I9e05ba91418a4f9ae2cd4880c06fbeecd54a07c8
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
de7ebc90b6
gnu: Add r-caper. 
* gnu/packages/cran.scm (r-caper): New variable.

Change-Id: Ie9953748f3703784c6e89f93fe3cc39e11cafca5
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
8b619c0588
gnu: r-roptim: Add test inputs. 
* gnu/packages/cran.scm (r-roptim)[native-inputs]: Add r-r-rsp and r-testthat.
[arguments]: Add phase 'set-HOME.

Change-Id: Ib2dce8bfe4480e81855cc34baf1daa2765bd2259
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
49cea1ae7d
gnu: r-littler: Add missing input. 
* gnu/packages/cran.scm (r-littler)[inputs]: Add libdeflate.

Change-Id: I9c9488f298db8acbb50cb674c7efb7f752350c34
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
670db718a5
gnu: r-matrix-utils: Add test input. 
* gnu/packages/cran.scm (r-matrix-utils)[native-inputs]: Add r-testthat.

Change-Id: Ieb4e25ec1b1ddb4d0a20c5ceefc15b9ceb29cd2c
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
7bd20948d6
gnu: r-git2r: Add test input. 
* gnu/packages/statistics.scm (r-git2r)[native-inputs]: Add tzdata-for-tests.

Change-Id: I1643a38b62b5e9d92a64d1d4bf7d44a4d2e62ecc
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
f711a137e2
gnu: r-tree: Add test input. 
* gnu/packages/cran.scm (r-tree)[native-inputs]: Add r-mass.

Change-Id: I8c6088f91a5e31adbe9adb55287176998029b7fb
 2024-12-03 10:54:04 +01:00
Ricardo Wurmus
d65090d3cd
gnu: r-secretbase: Fix tests. 
* gnu/packages/cran.scm (r-secretbase)[arguments]: Add phase 'set-HOME.

Change-Id: I26ce3293cbc406de2a09ed4bac6ee45d7c08b9b5
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
61f6f35f9e
gnu: r-xmapbridge: Add test input. 
* gnu/packages/bioconductor.scm (r-xmapbridge)[native-inputs]: Add
r-rcolorbrewer.

Change-Id: I231a68e013192a9ce669f23c4a5342ee917ffede
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
c241da0a89
gnu: r-signal: Add test input. 
* gnu/packages/cran.scm (r-signal)[native-inputs]: Add r-pracma.

Change-Id: I62ff2b66f14eb6aad2019c6763e4848d57fe100c
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
8359559cd4
gnu: r-preprocesscore: Disable tests. 
* gnu/packages/bioconductor.scm (r-preprocesscore)[arguments]: Disable tests.

Change-Id: If3704b4fdf712b8ab65c02f55ed1c0cefc64fc8e
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
3d8078fa80
gnu: r-fit-models: Add test input. 
* gnu/packages/statistics.scm (r-fit-models)[native-inputs]: Add r-mass.

Change-Id: I97008b4f28248ed38e5a94676c3396e52c742242
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
6ae99271de
gnu: r-assertive-base: Add test inputs. 
* gnu/packages/bioconductor.scm (r-iclusterplus)[native-inputs]: Add r-testthat.

Change-Id: I7aaae367d8db4a3f3e4951820fec4a37ba6fd473
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
9282e72e3a
gnu: r-rjava: Add missing input. 
* gnu/packages/cran.scm (r-rjava)[inputs]: Add libdeflate.

Change-Id: Id6d3a79ff77a19f2f42a3f22e6b4c1a509146237
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
9914706c38
gnu: r-iclusterplus: Add test inputs. 
* gnu/packages/bioconductor.scm (r-iclusterplus)[native-inputs]: Add r-biocgenerics.

Change-Id: Ic533681df4abd0f4d73a40ba4e3cf00a9d3fb1f2
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
421061f14e
gnu: r-mcmc: Add test inputs. 
* gnu/packages/cran.scm (r-mcmc)[native-inputs]: Add r-iso and r-xtable.

Change-Id: I9da2118db506e357bd0500e5ddf65566fa33298c
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
294b4f0788
gnu: r-tgconfig: Add test input. 
* gnu/packages/statistics.scm (r-tgconfig)[native-inputs]: Add r-testthat.

Change-Id: Ie016b7a90ff39d9023f4e9499b32b1ea151ae3d4
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
33dbde68f0
gnu: r-bb: Add test inputs. 
* gnu/packages/cran.scm (r-bb)[native-inputs]: Add r-numderiv and r-setrng.
[arguments]: Disable building vignettes.

Change-Id: Ib0b9d7fb96e2a246495ce41b7dcb41aa7331f6aa
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
ed23ab693e
gnu: r-perm: Add test input. 
* gnu/packages/cran.scm (r-perm)[native-inputs]: Add r-coin.

Change-Id: I8eaf82a8e8b238f264a0757e19af9b3c3cb984a0
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
d8fa5aae65
gnu: r-rann-l1: Add test input. 
* gnu/packages/cran.scm (r-rann-l1)[native-inputs]: Add r-testthat.

Change-Id: Ic98cd970b35287520a0d5d83f3398b714ae42f0f
 2024-12-03 10:54:03 +01:00
Ricardo Wurmus
1aa0e526d5
gnu: r-tdthap: Fix tests. 
* gnu/packages/cran.scm (r-tdthap)[arguments]: Add phase 'compatibility.

Change-Id: Id4854b8b0403467819c1b4a589665f4ae1afddd4
 2024-12-03 10:54:02 +01:00
Ricardo Wurmus
be1f5b0570
gnu: r-datasaurus: Add test inputs. 
* gnu/packages/statistics.scm (r-datasaurus)[native-inputs]: Add r-testthat.

Change-Id: I60f057030b79f9cacbc1c4685a6b39e2b3b716e7
 2024-12-03 10:54:02 +01:00