gnu: Add r-rnaseqdata-hnrnpc-bam-chr14.

* gnu/packages/bioconductor.scm (r-rnaseqdata-hnrnpc-bam-chr14): New variable.

Change-Id: If2f9bf10e3e1396cfd31e3278020d623ce2253e0
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Ricardo Wurmus 2024-11-26 11:43:14 +01:00 committed by Andreas Enge
parent 073056638c
commit 40befd7f1e
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@ -2857,6 +2857,31 @@ (define-public r-parathyroidse
;; The author(s) mentions only LGPL without any specific version.
(license license:lgpl2.1+)))
(define-public r-rnaseqdata-hnrnpc-bam-chr14
(package
(name "r-rnaseqdata-hnrnpc-bam-chr14")
(version "0.44.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "RNAseqData.HNRNPC.bam.chr14" version
'experiment))
(sha256
(base32 "1yhr798bbv3mc8wnalz4wag1np6kyq6akb0mbpvj47130ifi0wbx"))))
(properties `((upstream-name . "RNAseqData.HNRNPC.bam.chr14")))
(build-system r-build-system)
(home-page "https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-1147/")
(synopsis
"Aligned reads from RNAseq experiment")
(description
"The package contains 8 BAM files, 1 per sequencing run. Each BAM file
was obtained by aligning the reads (paired-end) to the full hg19 genome with
@code{TopHat2}, and then subsetting to keep only alignments on chr14. See
accession number E-MTAB-1147 in the @code{ArrayExpress} database for details
about the experiment, including links to the published study (by Zarnack et
al., 2012) and to the FASTQ files.")
(license license:lgpl2.0+)))
(define-public r-rtcga-rnaseq
(package
(name "r-rtcga-rnaseq")