gnu: r-reportingtools: Add missing inputs.

* gnu/packages/bioconductor.scm (r-reportingtools)[native-inputs]: Add
r-all, r-genefilter, r-hgu95av2-db, r-org-hs-eg-db, r-org-mm-eg-db,
r-org-sc-sgd-db, r-pasilla, and r-shiny.
[properties]: Tell updater to ignore r-gsealm.

Change-Id: I9512bbc7a96c328ee05e15bc898969494dca4be0
This commit is contained in:
Ricardo Wurmus 2024-12-01 08:44:31 +01:00 committed by Andreas Enge
parent 7410d8fc1b
commit 161518633d
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@ -11946,7 +11946,10 @@ (define-public r-reportingtools
(snippet
'(delete-file "inst/extdata/jslib/jquery-1.8.0.min.js"))))
(properties
`((upstream-name . "ReportingTools")))
`((upstream-name . "ReportingTools")
;; This is mentioned in microarrayAnalysis.Rnw, but the package doesn't
;; exist and apparently isn't needed after all.
(updater-ignored-native-inputs . ("r-gsealm"))))
(build-system r-build-system)
(arguments
(list
@ -11987,7 +11990,17 @@ (define-public r-reportingtools
r-r-utils
r-xml))
(native-inputs
(list esbuild r-rmarkdown r-runit
(list esbuild
r-all
r-genefilter
r-hgu95av2-db
r-org-hs-eg-db
r-org-mm-eg-db
r-org-sc-sgd-db
r-pasilla
r-rmarkdown
r-runit
r-shiny
(origin
(method url-fetch)
(uri "https://code.jquery.com/jquery-1.8.0.js")