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gnu: python-vedo: Update to 2022.2.0.

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* gnu/packages/python-science.scm (python-vedo): Update to 2022.2.0.
[arguments]: Add 'fix-tests' phase.
[inputs]: Move fenics and python-matplotlib to propagated-inputs.
Move python-pkgconfig from here...
[native-inputs]: ...to here.
[propagated-inputs]: Add python-deprecated (and fenics and
python-matplotlib).
[description]: Make description more accurate.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
This commit is contained in:
Paul A. Patience 2022-04-22 20:26:08 +00:00 • committed by Ludovic Courtès
parent 9edc0f3dbb
commit e606e02844
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1 changed files with 19 additions and 12 deletions
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31
gnu/packages/python-science.scm
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@ -17,6 +17,7 @@
;;; Copyright © 2021 Felix Gruber <felgru@posteo.net> ;;; Copyright © 2021 Felix Gruber <felgru@posteo.net>
;;; Copyright © 2022 Malte Frank Gerdes <malte.f.gerdes@gmail.com> ;;; Copyright © 2022 Malte Frank Gerdes <malte.f.gerdes@gmail.com>
;;; Copyright © 2022 Guillaume Le Vaillant <glv@posteo.net> ;;; Copyright © 2022 Guillaume Le Vaillant <glv@posteo.net>
;;; Copyright © 2022 Paul A. Patience <paul@apatience.com>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -858,21 +859,28 @@ readable.")
(define-public python-vedo (define-public python-vedo
(package (package
(name "python-vedo") (name "python-vedo")
(version "2021.0.3") (version "2022.2.0")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
(url "https://github.com/marcomusy/vedo") (url "https://github.com/marcomusy/vedo")
(commit version))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"18i3ajh5jzhpc86di15lwh4jv97jhm627ii877sa4yhv6abzjfpn")))) "1hhv4xc4bphhd1zrnf7r6fpf65xvkdqmb1lh51qg1xpv91h2az0h"))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
`(#:phases `(#:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-after 'unpack 'fix-tests
;; These tests require online data.
(lambda _
(substitute* "tests/common/test_actors.py"
(("^st = .*") "")
(("^assert isinstance\\(st\\.GetTexture\\(\\), .*") ""))
(delete-file "tests/common/test_pyplot.py")))
(add-after 'build 'mpi-setup (add-after 'build 'mpi-setup
,%openmpi-setup) ,%openmpi-setup)
(replace 'check (replace 'check
@ -887,16 +895,16 @@ readable.")
'("common" "dolfin")))))) '("common" "dolfin"))))))
;; Disable the sanity check, which fails with the following error: ;; Disable the sanity check, which fails with the following error:
;; ;;
;; ...checking requirements: ERROR: vedo==2021.0.3 DistributionNotFound(Requirement.parse('vtk'), {'vedo'}) ;; ...checking requirements: ERROR: vedo==2022.2.0 DistributionNotFound(Requirement.parse('vtk<9.1.0'), {'vedo'})
(delete 'sanity-check)))) (delete 'sanity-check))))
(inputs ; for the check phase (native-inputs
(list fenics (list pkg-config
python-matplotlib
python-pkgconfig)) python-pkgconfig))
(native-inputs ; for python-pkgconfig
(list pkg-config))
(propagated-inputs (propagated-inputs
(list python-numpy (list fenics
python-deprecated
python-matplotlib
python-numpy
vtk)) vtk))
(home-page "https://github.com/marcomusy/vedo") (home-page "https://github.com/marcomusy/vedo")
(synopsis (synopsis
@ -907,8 +915,7 @@ scientific analysis and visualization. The package provides a wide
range of functionalities for working with three-dimensional meshes and range of functionalities for working with three-dimensional meshes and
point clouds. It can also be used to generate high quality point clouds. It can also be used to generate high quality
two-dimensional renderings such as scatter plots and histograms. two-dimensional renderings such as scatter plots and histograms.
@code{vedo} is based on @code{vtk} and @code{numpy}, with no other @code{vedo} is based on @code{vtk} and @code{numpy}.")
dependencies.")
;; vedo is released under the Expat license. Included fonts are ;; vedo is released under the Expat license. Included fonts are
;; covered by the OFL license and textures by the CC0 license. ;; covered by the OFL license and textures by the CC0 license.
;; The earth images are in the public domain. ;; The earth images are in the public domain.