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gnu: snakemake: Update to 5.32.2.

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* gnu/packages/python-xyz.scm (snakemake): Update to 5.32.2.
[arguments]: Adjust patch in call-wrapper-not-wrapped-snakemake.
This commit is contained in:
Ricardo Wurmus 2021-03-12 12:58:28 +01:00
parent 825cc7e0d4
commit ddc1cddded
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GPG key ID: 197A5888235FACAC
1 changed files with 3 additions and 3 deletions
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6
gnu/packages/python-xyz.scm
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@ -7942,13 +7942,13 @@ (define-public python-datrie
(define-public snakemake
(package
(name "snakemake")
(version "5.7.1")
(version "5.32.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "snakemake" version))
(sha256
(base32 "1pnpvvn8n2a78cg360wz3ldmpqrsm2wzi0c0dmvki9fnsw6fxdas"))))
(base32 "13013gdavwvyj1qr9xfi9fpwhb3km8c3z53bja5b7ic3sb2z6dgz"))))
(build-system python-build-system)
(arguments
;; TODO: Package missing test dependencies.
@ -7960,7 +7960,7 @@ (define-public snakemake
;; this by calling the snakemake wrapper instead.
(add-after 'unpack 'call-wrapper-not-wrapped-snakemake
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "snakemake/executors.py"
(substitute* "snakemake/executors/__init__.py"
(("\\{sys.executable\\} -m snakemake")
(string-append (assoc-ref outputs "out")
"/bin/snakemake")))