From d597926171391d1663f725c89b315c2ee5a7a8ec Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 26 Nov 2024 09:40:51 +0100 Subject: [PATCH] gnu: Add r-oligodata. * gnu/packages/bioconductor.scm (r-oligodata): New variable. Change-Id: I605b877f91c068180c55da5ecbbd62b6071fde3c --- gnu/packages/bioconductor.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index dacf9605c3..752f9db565 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -401,6 +401,28 @@ (define-public r-mpo-db even help to identify disease associations that are not obvious.") (license license:artistic2.0))) +(define-public r-oligodata + (package + (name "r-oligodata") + (version "1.8.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "oligoData" version + 'annotation)) + (sha256 + (base32 "1d1yfms3jv2c4s255xnh8yxwijrj35skw3nxds7l46y88lg3qn8y")))) + (properties `((upstream-name . "oligoData"))) + (build-system r-build-system) + (propagated-inputs (list r-oligo)) + (home-page "https://bioconductor.org/packages/oligoData") + (synopsis "Dataset samples for the oligo package") + (description + "This package provides dataset samples (Affymetrix: Expression, Gene, +Exon, SNP; @code{NimbleGen}: Expression, Tiling) to be used with the +@code{oligo} package.") + (license license:lgpl2.0+))) + (define-public r-org-eck12-eg-db (package (name "r-org-eck12-eg-db")