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gnu: Add r-bsgenome-hsapiens-ncbi-grch38.

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* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ncbi-grch38): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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Mădălin Ionel Patrașcu 2020-02-25 14:52:25 +01:00 committed by Ricardo Wurmus
parent 1fc47a9b49
commit c51c0033d0
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gnu/packages/bioconductor.scm
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@ -224,6 +224,30 @@ (define-public r-bsgenome-hsapiens-1000genomes-hs37d5
1000genomes phase2 reference genome sequence (hs37d5), based on NCBI GRCh37.")
(license license:artistic2.0)))
(define-public r-bsgenome-hsapiens-ncbi-grch38
(package
(name "r-bsgenome-hsapiens-ncbi-grch38")
(version "1.3.1000")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BSgenome.Hsapiens.NCBI.GRCh38"
version 'annotation))
(sha256
(base32
"0y75qdq578fh6420vbvsbwmdw8jvr3g06qli2h3vj3pxmjykh9c1"))))
(properties `((upstream-name . "BSgenome.Hsapiens.NCBI.GRCh38")))
(build-system r-build-system)
(propagated-inputs `(("r-bsgenome" ,r-bsgenome)))
(home-page
"https://bioconductor.org/packages/release/data/annotation/html/\
BSgenome.Hsapiens.NCBI.GRCh38.html")
(synopsis "Full genome sequences for Homo sapiens (GRCh38)")
(description
"This package provides full genome sequences for Homo sapiens (Human) as
provided by NCBI (GRCh38, 2013-12-17) and stored in Biostrings objects.")
(license license:artistic2.0)))
(define-public r-bsgenome-hsapiens-ucsc-hg19-masked
(package
(name "r-bsgenome-hsapiens-ucsc-hg19-masked")