From ba9573b14e67c2fdd9ac4c56daeaa5f3d03b7486 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 4 Nov 2021 22:04:28 +0000 Subject: [PATCH] gnu: r-rbowtie2: Update to 2.0.0. * gnu/packages/bioconductor.scm (r-rbowtie2): Update to 2.0.0. [inputs]: Add samtools. [propagated-inputs]: Add r-magrittr and r-rsamtools. --- gnu/packages/bioconductor.scm | 10 +++++++--- 1 file changed, 7 insertions(+), 3 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index c1b7f0dd57..766e4fab7c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9007,18 +9007,22 @@ (define-public r-zfpkm (define-public r-rbowtie2 (package (name "r-rbowtie2") - (version "1.14.0") + (version "2.0.0") (source (origin (method url-fetch) (uri (bioconductor-uri "Rbowtie2" version)) (sha256 (base32 - "0r5yqjal48xlcv5cidi7p3zwygvsllmv2zzkwkc9kfq083l2i4ih")))) + "0xpvrx2ak9x913sym4l46ycwbnmpcdwb3bf3dfd2gsp0krv8vh1x")))) (properties `((upstream-name . "Rbowtie2"))) (build-system r-build-system) + (propagated-inputs + `(("r-magrittr" ,r-magrittr) + ("r-rsamtools" ,r-rsamtools))) (inputs - `(("zlib" ,zlib))) + `(("samtools" ,samtools) + ("zlib" ,zlib))) (native-inputs `(("r-knitr" ,r-knitr))) (home-page "https://bioconductor.org/packages/Rbowtie2/")