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gnu: python-schema-salad: Update to 8.8.20241206093842.
* gnu/packages/bioinformatics.scm (python-schema-salad): Update to 8.8.20241206093842. [arguments]: Patch tox.ini. [propagated-inputs]: Remove python-importlib-resources, python-setuptools, and python-typing-extensions. [native-inputs]: Add python-cachecontrol, python-mypy, python-setuptools, python-setuptools-scm, python-types-dataclasses, python-types-requests, and python-types-setuptools. Change-Id: I22ca7ad772078192117a1139adca410b53844008
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1 changed files with 16 additions and 8 deletions
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@ -5935,14 +5935,14 @@ (define-public python-pyfasta
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(define-public python-schema-salad
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(package
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(name "python-schema-salad")
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(version "8.5.20240102191335")
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(version "8.8.20241206093842")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "schema-salad" version))
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(uri (pypi-uri "schema_salad" version))
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(sha256
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(base32
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"035202p696i3jylb8b3nm9qcxsqby15hhqn1dl4nrz73a17p0ckx"))))
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"13vx3lqivfzsh1qdvx89vxnn25l3ssmzyh06g74psl4kmf9pj51a"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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@ -5956,6 +5956,8 @@ (define-public python-schema-salad
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(string-append "version=\"" #$version "\"")))))
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(add-before 'check 'skip-failing-tests
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(lambda _
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(substitute* "tox.ini"
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(("^addopts=.*") ""))
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;; Skip tests that require network access.
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(let ((skip-test
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(lambda (test-pattern)
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@ -5973,16 +5975,22 @@ (define-public python-schema-salad
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(skip-test all)))))))))
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(propagated-inputs
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(list python-cachecontrol
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python-importlib-resources
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python-mistune
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python-mypy-extensions
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python-rdflib
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python-requests
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python-ruamel.yaml
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python-setuptools ; For pkg_resources.
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python-typing-extensions))
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python-ruamel.yaml))
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(native-inputs
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(list python-black python-pytest python-pytest-runner
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(list python-black
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python-cachecontrol
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python-mypy
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python-pytest
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python-pytest-runner
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python-setuptools
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python-setuptools-scm
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python-types-dataclasses
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python-types-requests
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python-types-setuptools
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python-wheel))
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(home-page "https://github.com/common-workflow-language/schema_salad")
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(synopsis "Schema Annotations for Linked Avro Data (SALAD)")
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