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gnu: Add r-saturn.
* gnu/packages/bioconductor.scm (r-saturn): New variable.
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@ -8803,6 +8803,40 @@ (define-public r-samr
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;; Any version of the LGPL
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(license license:lgpl3+)))
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(define-public r-saturn
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(package
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(name "r-saturn")
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(version "1.8.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "satuRn" version))
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(sha256
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(base32
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"0frm7iblxkc8ajcdqrfgsvf4krn6x8cr3mx7fnzq06xij0mqm3sj"))))
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(properties `((upstream-name . "satuRn")))
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(build-system r-build-system)
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(propagated-inputs (list r-biocparallel
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r-boot
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r-ggplot2
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r-limma
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r-locfdr
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r-matrix
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r-pbapply
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r-summarizedexperiment))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/statOmics/satuRn")
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(synopsis
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"Analysis of differential transcript usage for scRNA-seq applications")
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(description
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"satuRn provides a framework for performing differential transcript usage
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analyses. The package consists of three main functions. The first function,
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@code{fitDTU}, fits quasi-binomial generalized linear models that model
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transcript usage in different groups of interest. The second function,
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@code{testDTU}, tests for differential usage of transcripts between groups of
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interest. Finally, @code{plotDTU} visualizes the usage profiles of
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transcripts in groups of interest.")
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(license license:artistic2.0)))
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(define-public r-scannotatr
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(package
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(name "r-scannotatr")
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