gnu: Add r-scdesign2.

* gnu/packages/bioinformatics.scm (r-scdesign2): New variable.

Change-Id: I25599df1cb8493bc2d9cc1839b5232aee03bf848
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Afkhami, Navid 2024-09-13 14:09:32 +00:00 committed by Ricardo Wurmus
parent 3d7b1a2768
commit aa7511eeb4
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@ -1184,6 +1184,33 @@ (define-public r-rhtslib12
developers of other R packages who wish to make use of HTSlib.")
(license license:lgpl2.0+))))
(define-public r-scdesign2
(let ((commit "554f2c4b1a7ee6cc04969a287df9b3b77d7bb2fe")
(revision "1"))
(package
(name "r-scdesign2")
(version (git-version "1.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/JSB-UCLA/scDesign2")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "09zkz6qdcx54092ab6761ja3pclax9xzana8dk8qvxrdbjshb8p7"))))
(properties `((upstream-name . "scDesign2")))
(build-system r-build-system)
(propagated-inputs (list r-mass r-pscl))
(native-inputs (list r-knitr))
(home-page "https://github.com/JSB-UCLA/scDesign2")
(synopsis "Statistical simulator for scRNA-seq with gene correlation")
(description
"This package offers a flexible statistical simulator for scRNA-seq data.
It can generate data that captures gene correlation. Additionally, it allows
for varying the number of cells and sequencing depth.")
(license license:expat))))
(define-public r-scenic
(let ((commit "cedf8490a634da550cea2c831544e5f7f14467d2")
(revision "1"))