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gnu: Add python-readpaf.

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* gnu/packages/bioinformatics.scm (python-readpaf): New variable.
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Navid Afkhami 2023-06-05 17:05:22 +02:00 committed by Ricardo Wurmus
parent 940665301d
commit 91e75bb35f
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1 changed files with 19 additions and 0 deletions
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gnu/packages/bioinformatics.scm
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@ -1998,6 +1998,25 @@ (define-public python-pairtools
")
(license license:expat)))
(define-public python-readpaf
(package
(name "python-readpaf")
(version "0.0.10")
(source (origin
(method url-fetch)
(uri (pypi-uri "readpaf" version))
(sha256
(base32
"15m6ffks4zwpp1ycwk6n02py6mw2yh7qr0vhpc178b91gldr97ia"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-pandas))
(home-page "https://github.com/alexomics/read-paf")
(synopsis "Minimap2 PAF file reader")
(description
"This is a fast parser for minimap2 PAF (Pairwise mApping Format)
files.")
(license license:expat)))
(define-public bioperl-minimal
(package
(name "bioperl-minimal")