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gnu: Add python-mne.
* gnu/packages/python-science.scm (python-mne): New variable.
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@ -40,6 +40,7 @@ (define-module (gnu packages python-science)
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#:use-module (gnu packages databases)
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#:use-module (gnu packages gcc)
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#:use-module (gnu packages image-processing)
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#:use-module (gnu packages jupyter)
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#:use-module (gnu packages machine-learning)
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#:use-module (gnu packages maths)
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#:use-module (gnu packages mpi)
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@ -51,6 +52,7 @@ (define-module (gnu packages python-science)
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#:use-module (gnu packages python-check)
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#:use-module (gnu packages python-web)
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#:use-module (gnu packages python-xyz)
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#:use-module (gnu packages qt)
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#:use-module (gnu packages simulation)
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#:use-module (gnu packages sphinx)
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#:use-module (gnu packages statistics)
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@ -1461,3 +1463,66 @@ (define-public python-mffpy
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files are directories containing several files of mostly xml files, but also
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binary files.")
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(license license:asl2.0)))
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(define-public python-mne
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(package
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(name "python-mne")
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(version "0.24.1")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "mne" version))
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(sha256
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(base32
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"039h0pwcvl4ywfa4ij7w6x61czd322csqr59yhzfil3a7b8gzjrq"))))
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(build-system python-build-system)
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(arguments
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;; The test data is distributed in a separate repository without a
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;; license, https://github.com/mne-tools/mne-testing-data
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`(#:tests? #f))
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(propagated-inputs (list python-numpy python-scipy
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python-matplotlib
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python-tqdm
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python-pooch
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python-decorator
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python-h5io
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python-packaging
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python-pymatreader
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python-pyqt
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python-pyqt5-sip
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python-sip
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python-scikit-learn
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python-nibabel
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python-numba
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python-h5py
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python-jinja2
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python-pandas
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python-numexpr
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jupyter
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python-picard
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python-statsmodels
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python-joblib
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python-psutil
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python-dipy
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vtk
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python-nilearn
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python-xlrd
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python-imageio
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python-imageio-ffmpeg
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python-traitlets
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python-pyvista
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python-pyvistaqt
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python-mffpy
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python-ipywidgets
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;; FIXME: add the following dependencies:
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;; python-ipyvtklink requires NPM to build
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;; mne-qt-browser is not included, because it
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;; depends on MNE.
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))
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(home-page "https://mne.tools/dev/")
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(synopsis "MNE-Python project for MEG and EEG data analysis")
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(description
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"Open-source Python package for exploring, visualizing, and
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analyzing human neurophysiological data: MEG, EEG, sEEG, ECoG, NIRS, and
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more.")
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(license license:bsd-3)))
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