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gnu: bamtools: Update to 2.5.2.
* gnu/packages/bioinformatics.scm (bamtools): Update to 2.5.2. [arguments]: Enable tests; remove extra phases. [inputs]: Add jsoncpp. [native-inputs]: Add pkg-config.
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1 changed files with 4 additions and 15 deletions
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@ -219,7 +219,7 @@ (define-public aragorn
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(define-public bamtools
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(package
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(name "bamtools")
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(version "2.5.1")
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(version "2.5.2")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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@ -228,21 +228,10 @@ (define-public bamtools
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(file-name (git-file-name name version))
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(sha256
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(base32
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"0nfb2ypcx9959xnbz6wxh6py3xfizgmg8nrknxl95c507m9hmq8b"))))
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"14lw571vbks138i0lj66qjdbk8iwa817x2zbpzij61vv1gdgfbn5"))))
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(build-system cmake-build-system)
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(arguments
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`(#:tests? #f ;no "check" target
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#:phases
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(modify-phases %standard-phases
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(add-before
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'configure 'set-ldflags
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(lambda* (#:key outputs #:allow-other-keys)
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(setenv "LDFLAGS"
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(string-append
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"-Wl,-rpath="
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(assoc-ref outputs "out") "/lib/bamtools"))
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#t)))))
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(inputs (list zlib))
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(inputs (list jsoncpp zlib))
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(native-inputs (list pkg-config))
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(home-page "https://github.com/pezmaster31/bamtools")
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(synopsis "C++ API and command-line toolkit for working with BAM data")
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(description
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