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gnu: packages/astronomy: Sort alphabetically.
* gnu/packages/astronomy.scm (python-cdflib, python-crds, python-drms, sextractor, stackistry): Sort variables alphabetically. Change-Id: I83b699e7d1b127deaa33459b173794e06b235807
This commit is contained in:
Sharlatan Hellseher
parent
ce44a09229
commit
88ef90a03a
1 changed files with 253 additions and 253 deletions
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@ -2020,6 +2020,57 @@ (define-public python-ccdproc
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bad pixel tracking throughout the reduction process.")
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(license license:bsd-3)))
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(define-public python-cdflib
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(package
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(name "python-cdflib")
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(version "1.3.2")
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(source
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(origin
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(method git-fetch) ; no tests in PyPI release
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(uri (git-reference
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(url "https://github.com/MAVENSDC/cdflib")
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(commit version)))
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(file-name (git-file-name name version))
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(sha256
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||||
(base32 "0g723s5xg7vd37vlbjpgpiljd3vxwccslwzcf619zvdnc2xbcw2c"))))
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(build-system pyproject-build-system)
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||||
(arguments
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||||
(list #:phases
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||||
#~(modify-phases %standard-phases
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||||
(add-before 'build 'set-env-version
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||||
(lambda _
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||||
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION"
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#$version)))
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||||
(add-before 'check 'set-home-env
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||||
(lambda _
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||||
(setenv "HOME" (getcwd)))))))
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||||
(native-inputs
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||||
(list python-astropy
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python-hypothesis
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python-pytest
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python-pytest-cov
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python-pytest-remotedata
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python-setuptools
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python-setuptools-scm
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python-xarray
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python-wheel))
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(propagated-inputs
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(list python-numpy))
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(home-page "https://github.com/MAVENSDC/cdflib")
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(synopsis "Python library to deal with NASA's CDF astronmical data format")
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(description "This package provides a Python @acronym{CDF, Computable
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Document Format} reader toolkit.
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It provides the following functionality:
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@itemize
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@item Ability to read variables and attributes from CDF files
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@item Writes CDF version 3 files
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@item Can convert between CDF time types (EPOCH/EPOCH16/TT2000) to other common
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time formats
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@item Can convert CDF files into XArray Dataset objects and vice versa,
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attempting to maintain ISTP compliance
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@end itemize")
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(license license:expat)))
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(define-public python-coolest
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(package
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(name "python-coolest")
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@ -2089,6 +2140,53 @@ (define-public python-cosmopy
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cosmological parameters e.g. redshift or luminosity-distance.")
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(license license:expat)))
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(define-public python-crds
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(package
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(name "python-crds")
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(version "12.0.8")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "crds" version))
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(sha256
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(base32 "09kdpaywj88n31jard4wbqmb9132qf6fk0ar2z6ca9vswavivfk8"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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;; XXX: Tests require Internet access to https://hst-crds.stsci.edu and
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;; additional test data. See:
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;; https://github.com/spacetelescope/crds/blob/master/setup_test_cache
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#:tests? #f))
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(propagated-inputs
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(list python-asdf
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python-astropy
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python-boto3
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python-filelock
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python-numpy
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python-parsley
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python-pysynphot
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python-roman-datamodels
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python-stsynphot
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python-requests))
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(native-inputs
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(list python-setuptools
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python-setuptools-scm
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python-wheel))
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(home-page "https://hst-crds.stsci.edu")
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(synopsis "Calibration Reference Data System for HST and JWST")
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(description
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"CRDS is a package used for working with astronomical reference files for
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the HST and JWST telescopes. CRDS is useful for performing various operations
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on reference files or reference file assignment rules. CRDS is used to
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assign, check, and compare reference files and rules, and also to predict
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those datasets which should potentially be reprocessed due to changes in
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reference files or assignment rules. CRDS has versioned rules which define
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the assignment of references for each type and instrument configuration. CRDS
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has web sites corresponding to each project @url{http://hst-crds.stsci.edu} or
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@url{https://jwst-crds.stsci.edu/} which record information about reference
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files and provide related services.")
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(license license:bsd-3)))
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(define-public python-czml3
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(package
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(name "python-czml3")
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@ -2167,6 +2265,52 @@ (define-public python-drizzle
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code to be greatly simplified.")
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(license license:bsd-3)))
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(define-public python-drms
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(package
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(name "python-drms")
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(version "0.8.0")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "drms" version))
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(sha256
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(base32 "19lqy510d7iyxfz445h2rn4d0rvmd4d3lnjmvbkvv270ckpfw09f"))))
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(build-system pyproject-build-system)
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(native-inputs
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||||
(list python-astropy python-pytest-astropy python-setuptools-scm))
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(propagated-inputs
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(list python-numpy python-pandas))
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(home-page "https://sunpy.org")
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(synopsis "Access astronomical HMI, AIA and MDI data with Python")
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(description
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"DRMS module provides an easy-to-use interface for accessing HMI, AIA and
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MDI data with Python. It uses the publicly accessible
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JSOC (@url{http://jsoc.stanford.edu/}) DRMS server by default, but can also be
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used with local NetDRMS sites.")
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(license license:bsd-2)))
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(define-public python-dust-extinction
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(package
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(name "python-dust-extinction")
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(version "1.5")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "dust_extinction" version))
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(sha256
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(base32 "0f0g6gh4kj83xfv0cdp30dahs80pnhsj7c6ryz3f59qf6d5zqard"))))
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(build-system pyproject-build-system)
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(propagated-inputs
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(list python-astropy python-scipy))
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(native-inputs
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(list python-pytest-astropy))
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(home-page "http://dust-extinction.readthedocs.io/")
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(synopsis "Interstellar Dust Extinction Models")
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(description
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"This package provides astronomical interstellar dust extinction curves
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implemented using the astropy.modeling framework.")
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(license license:bsd-3)))
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(define-public python-ephem
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(package
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(name "python-ephem")
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@ -3170,115 +3314,6 @@ (define-public python-sunkit-image
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"This package provides an image processing toolbox for Solar Physics.")
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(license license:bsd-2)))
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(define-public sextractor
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(package
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(name "sextractor")
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(version "2.28.0")
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/astromatic/sextractor")
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(commit version)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "15v7brjiraj2rdyxiidcgb58b3dqzdd363j31cjrfqhd1wc8ii5j"))))
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(build-system gnu-build-system)
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;; NOTE: (Sharlatan-20210124T103117+0000): Building with `atlas' is failing
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;; due to missing shared library which required on configure phase. Switch
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;; build to use `openblas' instead. It requires FFTW with single precision
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;; `fftwf'.
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(arguments
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(list
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#:configure-flags
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#~(list
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"--enable-openblas"
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(string-append "--with-cfitsio-incdir="
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#$(this-package-input "cfitsio") "/include")
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(string-append "--with-cfitsio-libdir="
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||||
#$(this-package-input "cfitsio") "/lib")
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||||
(string-append "--with-fftw-incdir="
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||||
#$(this-package-input "fftwf") "/include")
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||||
(string-append "--with-fftw-libdir="
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||||
#$(this-package-input "fftwf") "/lib")
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(string-append "--with-openblas-incdir="
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||||
#$(this-package-input "openblas") "/include")
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||||
(string-append "--with-openblas-libdir="
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||||
#$(this-package-input "openblas") "/lib"))))
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||||
(native-inputs
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||||
(list autoconf automake libtool))
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||||
(inputs
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||||
(list cfitsio fftwf openblas))
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||||
(home-page "https://www.astromatic.net/software/sextractor")
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(synopsis "Extract catalogs of sources from astronomical images")
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(description
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||||
"SExtractor is a program that builds a catalogue of objects from an
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astronomical image. Although it is particularly oriented towards reduction of
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large scale galaxy-survey data, it can perform reasonably well on moderately
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crowded star fields.")
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(license license:gpl3+)))
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(define-public stackistry
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(package
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(name "stackistry")
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(version "0.3.0")
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/GreatAttractor/stackistry")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32 "0rz29v33n0x0k40hv3v79ym5ylch1v0pbph4i21809gz2al5p7dq"))))
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(build-system gnu-build-system)
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(arguments
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||||
(list
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||||
#:tests? #f ; No test target
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#:make-flags
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#~(list
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(string-append
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"SKRY_INCLUDE_PATH=" #$(this-package-input "libskry") "/include")
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(string-append
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"SKRY_LIB_PATH=-L" #$(this-package-input "libskry") "/lib")
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(string-append
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"LIBAV_INCLUDE_PATH=" #$(this-package-input "ffmpeg") "/include"))
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#:phases
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||||
#~(modify-phases %standard-phases
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||||
;; no configure and tests are provided
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(delete 'configure)
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||||
(add-after 'unpack 'fix-paths
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||||
(lambda _
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(substitute* "src/main.cpp"
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(("\"\\.\\.\", \"lang\"")
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||||
"\"../share/stackistry\", \"lang\""))
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||||
(substitute* "src/utils.cpp"
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(("\"\\.\\.\", \"icons\"")
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||||
"\"../share/stackistry\", \"icons\""))))
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||||
(replace 'install
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||||
;; The Makefile lacks an ‘install’ target.
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||||
(lambda _
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||||
(let* ((out #$output)
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||||
(bin (string-append out "/bin"))
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||||
(icons (string-append out "/share/stackistry/icons"))
|
||||
(lang (string-append out "/share/stackistry/lang")))
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||||
(copy-recursively "bin" bin)
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||||
(copy-recursively "icons" icons)
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||||
(copy-recursively "lang" lang)))))))
|
||||
(native-inputs
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||||
(list pkg-config))
|
||||
(inputs
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||||
(list gtkmm-3 libskry ffmpeg-4))
|
||||
(home-page "https://github.com/GreatAttractor/stackistry")
|
||||
(synopsis "Astronomical lucky imaging/image stacking tool")
|
||||
(description
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||||
"Stackistry implements the lucky imaging principle of astronomical
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||||
imaging: creating a high-quality still image out of a series of many (possibly
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thousands) low quality ones (blurred, deformed, noisy). The resulting image
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stack typically requires post-processing, including sharpening (e.g. via
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deconvolution). Such post-processing is not performed by Stackistry.")
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(license license:gpl3+)))
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||||
;; XXX: Upgrading to the latest version requires Python3.11+ and fresh
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||||
;; versions of numpy, PyYAML, packaging, Pandas and matplotlib, see
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||||
;; <https://github.com/astropy/astropy/blob/v7.0.0/CHANGES.rst
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@ -3661,57 +3696,6 @@ (define-public python-astroscrappy
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specifically in the C code.")
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||||
(license license:bsd-3)))
|
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(define-public python-cdflib
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(package
|
||||
(name "python-cdflib")
|
||||
(version "1.3.2")
|
||||
(source
|
||||
(origin
|
||||
(method git-fetch) ; no tests in PyPI release
|
||||
(uri (git-reference
|
||||
(url "https://github.com/MAVENSDC/cdflib")
|
||||
(commit version)))
|
||||
(file-name (git-file-name name version))
|
||||
(sha256
|
||||
(base32 "0g723s5xg7vd37vlbjpgpiljd3vxwccslwzcf619zvdnc2xbcw2c"))))
|
||||
(build-system pyproject-build-system)
|
||||
(arguments
|
||||
(list #:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-before 'build 'set-env-version
|
||||
(lambda _
|
||||
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION"
|
||||
#$version)))
|
||||
(add-before 'check 'set-home-env
|
||||
(lambda _
|
||||
(setenv "HOME" (getcwd)))))))
|
||||
(native-inputs
|
||||
(list python-astropy
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||||
python-hypothesis
|
||||
python-pytest
|
||||
python-pytest-cov
|
||||
python-pytest-remotedata
|
||||
python-setuptools
|
||||
python-setuptools-scm
|
||||
python-xarray
|
||||
python-wheel))
|
||||
(propagated-inputs
|
||||
(list python-numpy))
|
||||
(home-page "https://github.com/MAVENSDC/cdflib")
|
||||
(synopsis "Python library to deal with NASA's CDF astronmical data format")
|
||||
(description "This package provides a Python @acronym{CDF, Computable
|
||||
Document Format} reader toolkit.
|
||||
It provides the following functionality:
|
||||
@itemize
|
||||
@item Ability to read variables and attributes from CDF files
|
||||
@item Writes CDF version 3 files
|
||||
@item Can convert between CDF time types (EPOCH/EPOCH16/TT2000) to other common
|
||||
time formats
|
||||
@item Can convert CDF files into XArray Dataset objects and vice versa,
|
||||
attempting to maintain ISTP compliance
|
||||
@end itemize")
|
||||
(license license:expat)))
|
||||
|
||||
(define-public python-ci-watson
|
||||
(package
|
||||
(name "python-ci-watson")
|
||||
|
|
@ -3789,99 +3773,6 @@ (define-public python-cmyt
|
|||
@code{red}, and others (@code{algae}, @code{pastel}, and @code{xray}).")
|
||||
(license license:bsd-3)))
|
||||
|
||||
(define-public python-crds
|
||||
(package
|
||||
(name "python-crds")
|
||||
(version "12.0.8")
|
||||
(source
|
||||
(origin
|
||||
(method url-fetch)
|
||||
(uri (pypi-uri "crds" version))
|
||||
(sha256
|
||||
(base32 "09kdpaywj88n31jard4wbqmb9132qf6fk0ar2z6ca9vswavivfk8"))))
|
||||
(build-system pyproject-build-system)
|
||||
(arguments
|
||||
(list
|
||||
;; XXX: Tests require Internet access to https://hst-crds.stsci.edu and
|
||||
;; additional test data. See:
|
||||
;; https://github.com/spacetelescope/crds/blob/master/setup_test_cache
|
||||
#:tests? #f))
|
||||
(propagated-inputs
|
||||
(list python-asdf
|
||||
python-astropy
|
||||
python-boto3
|
||||
python-filelock
|
||||
python-numpy
|
||||
python-parsley
|
||||
python-pysynphot
|
||||
python-roman-datamodels
|
||||
python-stsynphot
|
||||
python-requests))
|
||||
(native-inputs
|
||||
(list python-setuptools
|
||||
python-setuptools-scm
|
||||
python-wheel))
|
||||
(home-page "https://hst-crds.stsci.edu")
|
||||
(synopsis "Calibration Reference Data System for HST and JWST")
|
||||
(description
|
||||
"CRDS is a package used for working with astronomical reference files for
|
||||
the HST and JWST telescopes. CRDS is useful for performing various operations
|
||||
on reference files or reference file assignment rules. CRDS is used to
|
||||
assign, check, and compare reference files and rules, and also to predict
|
||||
those datasets which should potentially be reprocessed due to changes in
|
||||
reference files or assignment rules. CRDS has versioned rules which define
|
||||
the assignment of references for each type and instrument configuration. CRDS
|
||||
has web sites corresponding to each project @url{http://hst-crds.stsci.edu} or
|
||||
@url{https://jwst-crds.stsci.edu/} which record information about reference
|
||||
files and provide related services.")
|
||||
(license license:bsd-3)))
|
||||
|
||||
(define-public python-drms
|
||||
(package
|
||||
(name "python-drms")
|
||||
(version "0.8.0")
|
||||
(source
|
||||
(origin
|
||||
(method url-fetch)
|
||||
(uri (pypi-uri "drms" version))
|
||||
(sha256
|
||||
(base32 "19lqy510d7iyxfz445h2rn4d0rvmd4d3lnjmvbkvv270ckpfw09f"))))
|
||||
(build-system pyproject-build-system)
|
||||
(native-inputs
|
||||
(list python-astropy python-pytest-astropy python-setuptools-scm))
|
||||
(propagated-inputs
|
||||
(list python-numpy python-pandas))
|
||||
(home-page "https://sunpy.org")
|
||||
(synopsis "Access astronomical HMI, AIA and MDI data with Python")
|
||||
(description
|
||||
"DRMS module provides an easy-to-use interface for accessing HMI, AIA and
|
||||
MDI data with Python. It uses the publicly accessible
|
||||
JSOC (@url{http://jsoc.stanford.edu/}) DRMS server by default, but can also be
|
||||
used with local NetDRMS sites.")
|
||||
(license license:bsd-2)))
|
||||
|
||||
(define-public python-dust-extinction
|
||||
(package
|
||||
(name "python-dust-extinction")
|
||||
(version "1.5")
|
||||
(source
|
||||
(origin
|
||||
(method url-fetch)
|
||||
(uri (pypi-uri "dust_extinction" version))
|
||||
(sha256
|
||||
(base32 "0f0g6gh4kj83xfv0cdp30dahs80pnhsj7c6ryz3f59qf6d5zqard"))))
|
||||
(build-system pyproject-build-system)
|
||||
(propagated-inputs
|
||||
(list python-astropy python-scipy))
|
||||
(native-inputs
|
||||
(list python-pytest-astropy))
|
||||
(home-page "http://dust-extinction.readthedocs.io/")
|
||||
(synopsis "Interstellar Dust Extinction Models")
|
||||
(description
|
||||
"This package provides astronomical interstellar dust extinction curves
|
||||
implemented using the astropy.modeling framework.")
|
||||
(license license:bsd-3)))
|
||||
|
||||
(define-public python-hvpy
|
||||
(package
|
||||
(name "python-hvpy")
|
||||
|
|
@ -6882,6 +6773,54 @@ (define-public scamp
|
|||
@end itemize")
|
||||
(license license:gpl3+)))
|
||||
|
||||
(define-public sextractor
|
||||
(package
|
||||
(name "sextractor")
|
||||
(version "2.28.0")
|
||||
(source
|
||||
(origin
|
||||
(method git-fetch)
|
||||
(uri (git-reference
|
||||
(url "https://github.com/astromatic/sextractor")
|
||||
(commit version)))
|
||||
(file-name (git-file-name name version))
|
||||
(sha256
|
||||
(base32 "15v7brjiraj2rdyxiidcgb58b3dqzdd363j31cjrfqhd1wc8ii5j"))))
|
||||
(build-system gnu-build-system)
|
||||
;; NOTE: (Sharlatan-20210124T103117+0000): Building with `atlas' is failing
|
||||
;; due to missing shared library which required on configure phase. Switch
|
||||
;; build to use `openblas' instead. It requires FFTW with single precision
|
||||
;; `fftwf'.
|
||||
(arguments
|
||||
(list
|
||||
#:configure-flags
|
||||
#~(list
|
||||
"--enable-openblas"
|
||||
(string-append "--with-cfitsio-incdir="
|
||||
#$(this-package-input "cfitsio") "/include")
|
||||
(string-append "--with-cfitsio-libdir="
|
||||
#$(this-package-input "cfitsio") "/lib")
|
||||
(string-append "--with-fftw-incdir="
|
||||
#$(this-package-input "fftwf") "/include")
|
||||
(string-append "--with-fftw-libdir="
|
||||
#$(this-package-input "fftwf") "/lib")
|
||||
(string-append "--with-openblas-incdir="
|
||||
#$(this-package-input "openblas") "/include")
|
||||
(string-append "--with-openblas-libdir="
|
||||
#$(this-package-input "openblas") "/lib"))))
|
||||
(native-inputs
|
||||
(list autoconf automake libtool))
|
||||
(inputs
|
||||
(list cfitsio fftwf openblas))
|
||||
(home-page "https://www.astromatic.net/software/sextractor")
|
||||
(synopsis "Extract catalogs of sources from astronomical images")
|
||||
(description
|
||||
"SExtractor is a program that builds a catalogue of objects from an
|
||||
astronomical image. Although it is particularly oriented towards reduction of
|
||||
large scale galaxy-survey data, it can perform reasonably well on moderately
|
||||
crowded star fields.")
|
||||
(license license:gpl3+)))
|
||||
|
||||
(define-public sgp4
|
||||
;; Version tag v1.0 is dated to <2021-01-11>, use the lates commit instead.
|
||||
(let ((commit "6a448b4850e5fbf8c1ca03bb5f6013a9fdc1fd91")
|
||||
|
|
@ -7083,6 +7022,67 @@ (define-public splash
|
|||
interactively in the plotting window.")
|
||||
(license license:gpl2+)))
|
||||
|
||||
(define-public stackistry
|
||||
(package
|
||||
(name "stackistry")
|
||||
(version "0.3.0")
|
||||
(source
|
||||
(origin
|
||||
(method git-fetch)
|
||||
(uri (git-reference
|
||||
(url "https://github.com/GreatAttractor/stackistry")
|
||||
(commit (string-append "v" version))))
|
||||
(file-name (git-file-name name version))
|
||||
(sha256
|
||||
(base32 "0rz29v33n0x0k40hv3v79ym5ylch1v0pbph4i21809gz2al5p7dq"))))
|
||||
(build-system gnu-build-system)
|
||||
(arguments
|
||||
(list
|
||||
#:tests? #f ; No test target
|
||||
#:make-flags
|
||||
#~(list
|
||||
(string-append
|
||||
"SKRY_INCLUDE_PATH=" #$(this-package-input "libskry") "/include")
|
||||
(string-append
|
||||
"SKRY_LIB_PATH=-L" #$(this-package-input "libskry") "/lib")
|
||||
(string-append
|
||||
"LIBAV_INCLUDE_PATH=" #$(this-package-input "ffmpeg") "/include"))
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
;; no configure and tests are provided
|
||||
(delete 'configure)
|
||||
(add-after 'unpack 'fix-paths
|
||||
(lambda _
|
||||
(substitute* "src/main.cpp"
|
||||
(("\"\\.\\.\", \"lang\"")
|
||||
"\"../share/stackistry\", \"lang\""))
|
||||
(substitute* "src/utils.cpp"
|
||||
(("\"\\.\\.\", \"icons\"")
|
||||
"\"../share/stackistry\", \"icons\""))))
|
||||
(replace 'install
|
||||
;; The Makefile lacks an ‘install’ target.
|
||||
(lambda _
|
||||
(let* ((out #$output)
|
||||
(bin (string-append out "/bin"))
|
||||
(icons (string-append out "/share/stackistry/icons"))
|
||||
(lang (string-append out "/share/stackistry/lang")))
|
||||
(copy-recursively "bin" bin)
|
||||
(copy-recursively "icons" icons)
|
||||
(copy-recursively "lang" lang)))))))
|
||||
(native-inputs
|
||||
(list pkg-config))
|
||||
(inputs
|
||||
(list gtkmm-3 libskry ffmpeg-4))
|
||||
(home-page "https://github.com/GreatAttractor/stackistry")
|
||||
(synopsis "Astronomical lucky imaging/image stacking tool")
|
||||
(description
|
||||
"Stackistry implements the lucky imaging principle of astronomical
|
||||
imaging: creating a high-quality still image out of a series of many (possibly
|
||||
thousands) low quality ones (blurred, deformed, noisy). The resulting image
|
||||
stack typically requires post-processing, including sharpening (e.g. via
|
||||
deconvolution). Such post-processing is not performed by Stackistry.")
|
||||
(license license:gpl3+)))
|
||||
|
||||
(define-public stellarium
|
||||
(package
|
||||
(name "stellarium")
|
||||
|
|
|
|||
Loading…
Reference in a new issue