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gnu: Add r-seqarray.
* gnu/packages/bioconductor.scm (r-seqarray): New variable.
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@ -9182,6 +9182,36 @@ (define-public r-scry
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single-cell RNA-seq.")
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(license license:artistic2.0)))
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(define-public r-seqarray
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(package
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(name "r-seqarray")
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(version "1.40.1")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "SeqArray" version))
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(sha256
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(base32
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"1771vk23psjavvi1nf2z8i2xawygdh4amawlijnskci8y9w4x5dm"))))
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(properties `((upstream-name . "SeqArray")))
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(build-system r-build-system)
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(propagated-inputs (list r-biostrings
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r-gdsfmt
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r-genomeinfodb
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r-genomicranges
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r-iranges
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r-s4vectors))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/zhengxwen/SeqArray")
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(synopsis
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"Data management of large-scale whole-genome sequence variant calls")
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(description
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"This package supports data management of large-scale whole-genome
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sequencing variant calls with thousands of individuals: genotypic data (e.g.,
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SNVs, indels and structural variation calls) and annotations in SeqArray GDS
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files are stored in an array-oriented and compressed manner, with efficient
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data access using the R programming language.")
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(license license:gpl3)))
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(define-public r-seqlogo
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(package
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(name "r-seqlogo")
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