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gnu: r-xcms: Disable tests.

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* gnu/packages/bioconductor.scm (r-xcms)[arguments]: Disable tests.
[properties]: Tell updater to ignore r-faahko.
[native-inputs]: Add r-msdata.

Change-Id: I2ee167828534a4046d15d740f6f25d8eff9d589f
This commit is contained in:
Ricardo Wurmus 2024-12-01 08:33:49 +01:00 committed by Andreas Enge
parent 9ee9113651
commit 6ea00f5ca2
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GPG key ID: F7D5C9BF765C61E3
1 changed files with 7 additions and 1 deletions
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gnu/packages/bioconductor.scm
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@ -19365,7 +19365,13 @@ (define-public r-xcms
(sha256
(base32
"1i9xiilrwvnzkdbzrdnbsw0sbwplfaklbsk3wz8kzv87ivipybh5"))))
(properties
'((upstream-name . "xcms")
;; Avoid dependency cycle.
(updater-ignored-native-inputs . ("r-faahko"))))
(build-system r-build-system)
;; Tests require faahKO, which depends on this package.
(arguments (list #:tests? #false))
(propagated-inputs
(list r-biobase
r-biocgenerics
@ -19386,7 +19392,7 @@ (define-public r-xcms
r-spectra
r-summarizedexperiment))
(native-inputs
(list r-knitr r-testthat))
(list r-knitr r-msdata r-testthat))
(home-page "https://bioconductor.org/packages/xcms/")
(synopsis "LC/MS and GC/MS mass spectrometry data analysis")
(description