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gnu: Add r-opencyto.
* gnu/packages/bioconductor.scm (r-opencyto): New variable.
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@ -5585,6 +5585,48 @@ (define-public r-flowstats
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package.")
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(license license:artistic2.0)))
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(define-public r-opencyto
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(package
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(name "r-opencyto")
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(version "1.24.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "openCyto" version))
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(sha256
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(base32
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"0h25nhvq1zq624wsgb55wjcgri9rcd2fnqkb31h9jdakr01dw2sb"))))
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(properties `((upstream-name . "openCyto")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-clue" ,r-clue)
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("r-data-table" ,r-data-table)
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("r-flowclust" ,r-flowclust)
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("r-flowcore" ,r-flowcore)
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("r-flowstats" ,r-flowstats)
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("r-flowviz" ,r-flowviz)
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("r-flowworkspace" ,r-flowworkspace)
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("r-graph" ,r-graph)
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("r-gtools" ,r-gtools)
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("r-ks" ,r-ks)
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("r-lattice" ,r-lattice)
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("r-mass" ,r-mass)
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("r-ncdfflow" ,r-ncdfflow)
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("r-plyr" ,r-plyr)
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("r-r-utils" ,r-r-utils)
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("r-rbgl" ,r-rbgl)
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("r-rcolorbrewer" ,r-rcolorbrewer)
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("r-rcpp" ,r-rcpp)
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("r-rrcov" ,r-rrcov)))
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(home-page "https://bioconductor.org/packages/openCyto")
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(synopsis "Hierarchical gating pipeline for flow cytometry data")
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(description
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"This package is designed to facilitate the automated gating methods in a
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sequential way to mimic the manual gating strategy.")
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(license license:artistic2.0)))
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(define-public r-flowsom
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(package
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(name "r-flowsom")
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