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gnu: python-scipy: Move input fields below arguments field.

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* gnu/packages/python-science.scm (python-scipy): Move inputs fields below the
arguments field.
[phases]: Use gexp.
{configure-openblas}: Use this-package-input.
{check}: Remove extraneous 'add-installed-pythonpath' call.
{install-doc}: Adjust accordingly.
This commit is contained in:
Maxim Cournoyer 2022-04-06 20:53:31 -04:00
parent 3f66c30dbd
commit 5a3634f461
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GPG key ID: 1260E46482E63562
1 changed files with 77 additions and 78 deletions
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49
gnu/packages/python-science.scm
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@ -6,7 +6,7 @@
;;; Copyright © 2016, 2022 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016-2020, 2022 Marius Bakke <marius@gnu.org>
;;; Copyright © 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019, 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2019, 2021, 2022 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2019 Giacomo Leidi <goodoldpaul@autistici.org>
;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2020, 2021, 2022 Vinicius Monego <monego@posteo.net>
@ -80,25 +80,12 @@
(uri (pypi-uri "scipy" version))
(sha256
(base32 "1gxsnw6viz2j3sm8ak2a8l7fcn4b2zm3kzfm8w57xxyyrzx7an5b"))))
(build-system python-build-system)
(propagated-inputs
(list python-numpy python-matplotlib python-pyparsing))
(inputs
(list openblas pybind11))
(native-inputs
(list python-cython
python-pydata-sphinx-theme
python-pytest
python-sphinx
python-sphinx-panels
python-numpydoc
gfortran
perl
which))
(outputs '("out" "doc"))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'disable-pythran
(lambda _
(setenv "SCIPY_USE_PYTHRAN" "0")))
@ -118,7 +105,7 @@
(string-append "@pytest.mark.skip(reason=\"Disabled by Guix\")\n"
m)))))
(add-before 'build 'configure-openblas
(lambda* (#:key inputs #:allow-other-keys)
(lambda _
(call-with-output-file "site.cfg"
(lambda (port)
(format port
@ -132,15 +119,16 @@ include_dirs = ~a/include
library_dirs = ~a/lib
atlas_libs = openblas
"
(assoc-ref inputs "openblas")
(assoc-ref inputs "openblas")
(assoc-ref inputs "openblas"))))))
#$(this-package-input "openblas")
#$(this-package-input "openblas")
#$(this-package-input "openblas"))))))
(add-after 'install 'install-doc
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((data (string-append (assoc-ref outputs "doc") "/share"))
(doc (string-append data "/doc/" ,name "-" ,version))
(doc (string-append data "/doc/" #$name "-" #$version))
(html (string-append doc "/html"))
(pyver ,(string-append "PYVER=" (version-major+minor
(pyver (string-append "PYVER="
#$(version-major+minor
(package-version python))))
;; By default it tries to run sphinx-build through the Python
;; interpreter which won't work with our shell wrapper.
@ -164,10 +152,21 @@ atlas_libs = openblas
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(with-directory-excursion "/tmp"
(invoke "python" "-c"
"import scipy; scipy.test(verbose=2)"))))))))
(propagated-inputs (list python-numpy python-matplotlib python-pyparsing))
(inputs (list openblas pybind11))
(native-inputs
(list python-cython
python-pydata-sphinx-theme
python-pytest
python-sphinx
python-sphinx-panels
python-numpydoc
gfortran
perl
which))
(home-page "https://www.scipy.org/")
(synopsis "The Scipy library provides efficient numerical routines")
(description "The SciPy library is one of the core packages that make up