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gnu: r-cellid: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-cellid): Update to 1.10.0. [propagated-inputs]: Add r-scater. [native-inputs]: Remove r-scater. Change-Id: I7be617a312fb009c6986e947e21b6cfd862db873
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1 changed files with 9 additions and 8 deletions
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@ -4477,20 +4477,20 @@ stochastic dropout events as well as systematic allelic imbalance is used.")
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(define-public r-cellid
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(define-public r-cellid
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(package
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(package
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(name "r-cellid")
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(name "r-cellid")
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(version "1.8.1")
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(version "1.10.0")
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(source (origin
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(source (origin
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(method url-fetch)
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(method url-fetch)
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(uri (bioconductor-uri "CelliD" version))
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(uri (bioconductor-uri "CelliD" version))
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(sha256
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(sha256
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(base32
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(base32
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"0vigvqjrlqbi5kviaj8qvyq3v8afgbc5pjrz7zmx2ckf4hdp0g03"))))
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"1x4kp8i204rqas2bgg4qanwdncafilymlpvxvfyv39zpdji91yv5"))))
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(properties `((upstream-name . "CelliD")))
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(properties `((upstream-name . "CelliD")))
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(build-system r-build-system)
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(build-system r-build-system)
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(propagated-inputs
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(propagated-inputs
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(list r-data-table
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(list r-biocparallel
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r-biocparallel
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r-data-table
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r-fastmatch
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r-fastmatch
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r-fgsea
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r-fgsea
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r-ggplot2
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r-ggplot2
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r-glue
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r-glue
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r-irlba
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r-irlba
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@ -4501,13 +4501,14 @@ stochastic dropout events as well as systematic allelic imbalance is used.")
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r-rcpparmadillo
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r-rcpparmadillo
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r-reticulate
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r-reticulate
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r-rtsne
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r-rtsne
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r-scater
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r-seurat
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r-seurat
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r-singlecellexperiment
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r-stringr
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r-stringr
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r-tictoc
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r-singlecellexperiment
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r-summarizedexperiment
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r-summarizedexperiment
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r-tictoc
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r-umap))
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r-umap))
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(native-inputs (list r-knitr r-scater))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/CelliD")
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(home-page "https://bioconductor.org/packages/CelliD")
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(synopsis
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(synopsis
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"Single cell gene signature extraction using multiple correspondence analysis")
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"Single cell gene signature extraction using multiple correspondence analysis")
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