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gnu: Add python-scrublet.
* gnu/packages/bioinformatics.scm (python-scrublet): New variable.
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@ -3459,6 +3459,35 @@ and record oriented data modeling and the Semantic Web.")
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resources for bioinformatics.")
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resources for bioinformatics.")
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(license license:bsd-3)))
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(license license:bsd-3)))
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(define-public python-scrublet
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(package
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(name "python-scrublet")
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(version "0.2.3")
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(source (origin
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(method url-fetch)
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(uri (pypi-uri "scrublet" version))
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(sha256
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(base32
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"0fk5pwk12yz9wpvwkl6j2l2g28f3x35b9r9n5bw6f0i9f0qgd191"))))
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(build-system pyproject-build-system)
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(arguments '(#:tests? #false)) ;there are none
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(propagated-inputs
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(list python-annoy
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python-cython
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python-matplotlib
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python-numba
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python-numpy
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python-pandas
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python-scikit-image
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python-scikit-learn
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python-scipy
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python-umap-learn))
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(home-page "https://github.com/swolock/scrublet")
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(synopsis "Tool to indentify and remove doublets in single-cell data")
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(description "This package provides a tool for identifying and removing
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doublets in single-cell RNA-seq data.")
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(license license:expat)))
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(define-public cwltool
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(define-public cwltool
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(package
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(package
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(name "cwltool")
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(name "cwltool")
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