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gnu: r-gkmsvm: Move back to (gnu packages cran).

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* gnu/packages/bioconductor.scm (r-gkmsvm): Move this variable from here...
* gnu/packages/cran.scm (r-gkmsvm): ...to here.
This commit is contained in:
Ricardo Wurmus 2021-03-15 12:15:18 +01:00
parent 1daedaa864
commit 3eeb7dbf04
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GPG key ID: 197A5888235FACAC
2 changed files with 26 additions and 27 deletions
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27
gnu/packages/bioconductor.scm
View file

@ -4042,33 +4042,6 @@ (define-public r-ioniser
surface of a flowcell.")
(license license:expat)))
;; This is a CRAN package, but it depends on packages from Bioconductor.
(define-public r-gkmsvm
(package
(name "r-gkmsvm")
(version "0.81.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "gkmSVM" version))
(sha256
(base32
"119g5rhc7ffyviz04r04aj5z1g6abnj3ddd01g7db505sdr6lapj"))))
(properties `((upstream-name . "gkmSVM")))
(build-system r-build-system)
(propagated-inputs
`(("r-kernlab" ,r-kernlab)
("r-rcpp" ,r-rcpp)
("r-rocr" ,r-rocr)
("r-seqinr" ,r-seqinr)))
(home-page "https://cran.r-project.org/web/packages/gkmSVM")
(synopsis "Gapped-kmer support vector machine")
(description
"This R package provides tools for training gapped-kmer SVM classifiers
for DNA and protein sequences. This package supports several sequence
kernels, including: gkmSVM, kmer-SVM, mismatch kernel and wildcard kernel.")
(license license:gpl2+)))
;; This is a CRAN package, but it depends on multtest from Bioconductor.
(define-public r-mutoss
(package

26
gnu/packages/cran.scm
View file

@ -16471,6 +16471,32 @@ (define-public r-ggraph
layer by layer.")
(license license:gpl3)))
(define-public r-gkmsvm
(package
(name "r-gkmsvm")
(version "0.81.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "gkmSVM" version))
(sha256
(base32
"119g5rhc7ffyviz04r04aj5z1g6abnj3ddd01g7db505sdr6lapj"))))
(properties `((upstream-name . "gkmSVM")))
(build-system r-build-system)
(propagated-inputs
`(("r-kernlab" ,r-kernlab)
("r-rcpp" ,r-rcpp)
("r-rocr" ,r-rocr)
("r-seqinr" ,r-seqinr)))
(home-page "https://cran.r-project.org/web/packages/gkmSVM")
(synopsis "Gapped-kmer support vector machine")
(description
"This R package provides tools for training gapped-kmer SVM classifiers
for DNA and protein sequences. This package supports several sequence
kernels, including: gkmSVM, kmer-SVM, mismatch kernel and wildcard kernel.")
(license license:gpl2+)))
(define-public r-varselrf
(package
(name "r-varselrf")