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gnu: python2-pandas: Fix build by reverting inherited fields.

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* gnu/packages/python-science.scm (python2-pandas)[arguments]: Do not inherit
field; revert to values at commit c0d43f6223.
[propagated-inputs]: Do not inherit.
[inputs]: Same.
[native-inputs]: Same.
This commit is contained in:
Ricardo Wurmus 2021-09-29 22:42:25 +02:00
parent aa4885b3fb
commit 3ee0b3ca56
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GPG key ID: 197A5888235FACAC
1 changed files with 55 additions and 2 deletions
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57
gnu/packages/python-science.scm
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@ -453,8 +453,61 @@ (define-public python2-pandas
;; from <https://github.com/pandas-dev/pandas/pull/29294>.
(substitute* "pandas/io/parsers.py"
(("if 'NULL byte' in msg:")
"if 'NULL byte' in msg or 'line contains NUL' in msg:"))
#t)))))))
"if 'NULL byte' in msg or 'line contains NUL' in msg:"))))))
(arguments
`(#:modules ((guix build utils)
(guix build python-build-system)
(ice-9 ftw)
(srfi srfi-26))
#:python ,python-2
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-which
(lambda* (#:key inputs #:allow-other-keys)
(let ((which (assoc-ref inputs "which")))
(substitute* "pandas/io/clipboard/__init__.py"
(("^CHECK_CMD = .*")
(string-append "CHECK_CMD = \"" which "\"\n"))))))
(replace 'check
(lambda _
(let ((build-directory
(string-append
(getcwd) "/build/"
(car (scandir "build"
(cut string-prefix? "lib." <>))))))
;; Disable the "strict data files" option which causes
;; the build to error out if required data files are
;; not available (as is the case with PyPI archives).
(substitute* "setup.cfg"
(("addopts = --strict-data-files") "addopts = "))
(with-directory-excursion build-directory
;; Delete tests that require "moto" which is not yet
;; in Guix.
(for-each delete-file
'("pandas/tests/io/conftest.py"
"pandas/tests/io/json/test_compression.py"
"pandas/tests/io/parser/test_network.py"
"pandas/tests/io/test_parquet.py"))
(invoke "pytest" "-vv" "pandas" "--skip-slow"
"--skip-network" "-k"
;; XXX: Due to the deleted tests above.
"not test_read_s3_jsonl"))))))))
(propagated-inputs
`(("python-numpy" ,python2-numpy)
("python-openpyxl" ,python2-openpyxl)
("python-pytz" ,python2-pytz)
("python-dateutil" ,python2-dateutil)
("python-xlrd" ,python2-xlrd)))
(inputs
`(("which" ,which)))
(native-inputs
`(("python-cython" ,python2-cython)
("python-beautifulsoup4" ,python2-beautifulsoup4)
("python-lxml" ,python2-lxml)
("python-html5lib" ,python2-html5lib)
("python-nose" ,python2-nose)
("python-pytest" ,python2-pytest)
("python-pytest-mock" ,python2-pytest-mock))))))
(define-public python-pyflow
(package