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gnu: Add r-ballgown.

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* gnu/packages/bioconductor.scm (r-ballgown): New variable.
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Ricardo Wurmus 2021-08-25 12:30:33 +02:00
parent f66759e0b2
commit 2f16659b40
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1 changed files with 34 additions and 0 deletions
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gnu/packages/bioconductor.scm
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@ -13666,6 +13666,40 @@ (define-public r-sushi
visualizations for publication-quality multi-panel figures.")
(license license:gpl2+)))
(define-public r-ballgown
(package
(name "r-ballgown")
(version "2.24.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ballgown" version))
(sha256
(base32
"0ff8z4pfgzai2q4aafclg36bhsi9jwl9xhh1p9fqhmikisscq7i1"))))
(properties `((upstream-name . "ballgown")))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-limma" ,r-limma)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-sva" ,r-sva)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/ballgown")
(synopsis "Flexible, isoform-level differential expression analysis")
(description
"This package provides tools for statistical analysis of assembled
transcriptomes, including flexible differential expression analysis,
visualization of transcript structures, and matching of assembled transcripts
to annotation.")
(license license:artistic2.0)))
(define-public r-tximeta
(package
(name "r-tximeta")