gnu: Add r-rtcga-rnaseq.

* gnu/packages/bioconductor.scm (r-rtcga-rnaseq): New variable.

Change-Id: I6e9287fe55da3f6db678603f115d790d273dacc2
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Ricardo Wurmus 2024-11-24 19:33:20 +01:00 committed by Andreas Enge
parent 49c0075061
commit 2109b5e81c
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@ -2724,6 +2724,32 @@ (define-public r-parathyroidse
;; The author(s) mentions only LGPL without any specific version.
(license license:lgpl2.1+)))
(define-public r-rtcga-rnaseq
(package
(name "r-rtcga-rnaseq")
(version "20151101.36.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "RTCGA.rnaseq" version
'experiment))
(sha256
(base32 "0yn89m988gvq4y5nv56581dlh6ydyhd6dkcx1clwalb453v390dz"))))
(properties `((upstream-name . "RTCGA.rnaseq")))
(build-system r-build-system)
(propagated-inputs (list r-rtcga))
(native-inputs (list r-knitr))
(home-page "https://bioconductor.org/packages/RTCGA.rnaseq")
(synopsis "Rna-seq datasets from The Cancer Genome Atlas Project")
(description
"This package provides rna-seq datasets from The Cancer Genome Atlas
Project for all cohorts types from @url{http://gdac.broadinstitute.org/}. The
Rna-seq data format is explained here
@url{https://wiki.nci.nih.gov/display/TCGA/RNASeq+Version+2}. The data source
is Illumina hiseq Level 3 RSEM normalized expression data from 2015-11-01
snapshot.")
(license license:gpl2)))
(define-public r-sesamedata
(package
(name "r-sesamedata")