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gnu: Add r-seuratextend.
* gnu/packages/bioinformatics.scm (r-seuratextend): New variable. Change-Id: I9ce0d90a2f05d4e074459046c380849cf9f63978 Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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@ -20317,6 +20317,52 @@ (define-public r-seurat-utils
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require functions from CodeAndRoll and MarkdownReports libraries.")
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(license license:gpl3))))
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(define-public r-seuratextend
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(let ((commit "5382e921f7b365c7b75b20d07cb455e4390fe36f")
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(revision "1"))
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(package
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(name "r-seuratextend")
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(version (git-version "1.0.7" revision commit))
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/huayc09/SeuratExtend")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "1rlx20jyfdrymxn8b9dsf9n9jk9rwjjx1wy2f00layvd57g9ch2q"))))
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(properties `((upstream-name . "SeuratExtend")))
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(build-system r-build-system)
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(propagated-inputs (list r-biocmanager
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r-dplyr
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r-ggplot2
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r-ggpubr
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r-glue
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r-hdf5r
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r-magrittr
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r-mosaic
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r-purrr
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r-remotes
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r-reshape2
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r-reticulate
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r-rlist
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r-scales
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r-seurat
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r-seuratextenddata
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r-seuratobject
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r-tidyr))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/huayc09/SeuratExtend")
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(synopsis "Enhanced toolkit for scRNA-seq analysis")
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(description
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"This package is designed to improve and simplify the analysis of
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scRNA-seq data. It uses the Seurat object for this purpose. It provides an
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array of enhanced visualization tools, an integrated functional and pathway
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analysis pipeline, seamless integration with popular Python tools, and a suite
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of utility functions to aid in data manipulation and presentation.")
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(license license:gpl3+))))
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(define-public r-seuratextenddata
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(let ((commit "e7f17d4bacca436705b06b2cd0c879f83add9271")
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(revision "1"))
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